Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931491.1_cds_XP_016478298.1_69951
CDS Infomation

[gene=LOC107799671] [db_xref=GeneID:107799671] [protein=glucan endo-1,3-beta-glucosidase 2-like] [protein_id=XP_016478298.1] [location=complement(join(11183..11336,11514..11541,11669..12922,15029..15095))] [gbkey=CDS]
Sequence

ATGGAAAATAACAGGGCTTTGCTTTTCTTGCTGTTTTTAGCTGTTTCTGCCGTTTTTGCT
GATGAAGATGTCTTTATTGGTGTGAACATTGGAACAGAACTTTCGGACATGCCTCATCCG
ACTCAAGTAGTTGCACTTCTTAGAGCCCAGCAAATTCGACATGTCCGGCTCTTCAATGCA
GATCGCGGCATGCTCCTTGCACTTGCAAATTCAGGCATCAAAGTTGCTGTTTCCGTGCCC
AATGAACAGCTTCTTGCTGTTGGTCAATCAAATGCTACTGCCGCTAATTGGGTTGCTCAA
AATGTTGTCTCACATTATCCAGCTACCAACATCACAACTATTTGTGTTGGTTCCGAGGTT
CTATCTGCCCTTCCAAATGCTGCACCTATCCTCAACAATGCCCTTAAGTTCATCCATTCA
GCGCTCGTGGCATCGAACCTGGATAGGCAAATAAAAGTTTCAACGCCTCTAGCTTCTTCC
ATCATCCTCGACTCGTTTCCCCCATCTCAGGCCTTCTTCAATCACACTCTGAAACCAGTA
TTAGTACCAATGCTCAAATTCCTGCAATCCACTGGTTCTTATTTCATGCTAAACGTGTAT
CCTTATTACGACTACATGCTATCCAACGGTGTCATTCCACTAGATTATGCTCTCTTCAGG
CCCCTAGCCGCAAATAAAGAAGCAGTGGACTCCAACACACTTTTGCATTATACTAACGTC
TTTGATGCAATGGTCGATGCTGCTTACTTTGCAATGCTTGATCTCAATTTCACTAATATT
CCGGTTATGGTGACTGAATCGGGATGGCCATCACAAGGCGACTCCGATGAACCTGATGCT
ACTTTAGACAATGCCAACACTTACAACAGCAATCTGATAAAGCATGTCCTAAACAAAACC
GGAACTCCCAAGCATCCCGGCATTGCTGTTAGTACGTACATCTACGAGCTATACAATGAG
GACAATAAGCCAGGGCATTTGTCAGAGAAGAATTGGGGATTATTTAATGCAAATGGCACG
CCAGTTTATATTCTACGCTTGACTGAATCAGGGTCTATGTTTGCAAATGATACTTCAAAT
CAGACTTATTGTGCTGCCAAAGACGGGGCGGATTCTAAAATGCTACAGGCTGCTTTGGAT
TGGGCTTGTGGACCTGGTAAGGTGGATTGTTCAGCGTTGTTGCAGGGGGAACGGTGTTAT
GAACCAGATAATGTCGCTGCACACGCTACCTATGCATTTGATGCCTACTATCACATGATG
GGTAGGGCTCCCGGGACATGTGACTTCAACGGGGTAGCTACTATCACCACAACAAATCCA
AGTCATGGTTCTTGTGTATTTTCTGGAAGTCTTGGCAGAAATGGCACTTTTGTAAATGGC
ACAGCTCCAGCTATGGATTCCACGACCTCATCATCTTCTCCTTCTCGGTATTTAAACAAC
AATGCCTATTCAACAATACTGACGATTCTTGGAATTCTTGTATGGAGCATGATTCTGTTG
TAG

Peptide Sequence

PEP ID

XP_016478298.1
PEP Infomation

PREDICTED: glucan endo-1,3-beta-glucosidase 2-like [Nicotiana tabacum]
Sequence

MENNRALLFLLFLAVSAVFADEDVFIGVNIGTELSDMPHPTQVVALLRAQQIRHVRLFNA
DRGMLLALANSGIKVAVSVPNEQLLAVGQSNATAANWVAQNVVSHYPATNITTICVGSEV
LSALPNAAPILNNALKFIHSALVASNLDRQIKVSTPLASSIILDSFPPSQAFFNHTLKPV
LVPMLKFLQSTGSYFMLNVYPYYDYMLSNGVIPLDYALFRPLAANKEAVDSNTLLHYTNV
FDAMVDAAYFAMLDLNFTNIPVMVTESGWPSQGDSDEPDATLDNANTYNSNLIKHVLNKT
GTPKHPGIAVSTYIYELYNEDNKPGHLSEKNWGLFNANGTPVYILRLTESGSMFANDTSN
QTYCAAKDGADSKMLQAALDWACGPGKVDCSALLQGERCYEPDNVAAHATYAFDAYYHMM
GRAPGTCDFNGVATITTTNPSHGSCVFSGSLGRNGTFVNGTAPAMDSTTSSSSPSRYLNN
NAYSTILTILGILVWSMILL

Transcript Sequence

Gene sequence data has not been registered.